- The Smart Dust control unit is still on the fritz and wreaking havoc on the town's communications systems. The bio-printer has gone missing and Holly (Felicia Day) is definitely not herself.
- The military rolls in to town.
Ally finds Carter and Andy having coffee. They know Shaw arrested Zane, but aren't concerned. Ally tells Carter that Jo, Henry and Holly aren't acting like themselves. Andy attributes it to the smart dust.
She watches Carter and Andy be way too interested in Dr. Tuckman as he gets coffee and gets in his car.
At GD, Jo brings Henry to talk to Grace in lock-up. She tells him if he says he helped her, she'll deny it. He says they have nothing to hold her on, which is why he's helping her escape. He punches a code to open the lock-up and tells her, ominously, that he'll never let her go.
Carter and Andy pull over Dr. Tuckman, a member of the Astraeus crew. They want him to come with them. "Back where you belong," Andy says. Carter puts him in the back of his cruiser.
At GD, Shaw interrogates Zane as Jo stands on Shaw's side. Zane points out they don't have enough evidence to arrest him. Shaw gets word Grace just escaped. Zane has a pretty airtight alibi.
Zane thinks Jo is acting weird.
At GD, Ally tells Fargo that people are acting weird, like they're brainwashed. Fargo hasn't heard that Carter found the control panel. And he didn't authorize the move of the bioprinter, contrary to what Henry said. He also didn't give Holly permission to start printing body blanks.
Ally tells Fargo about the other Z waves they found in the mainframe. Ally suggests the program told Holly what to do through the energy pulse. She wonders if the hands and whoever they belonged to in the computer that she and Zane saw got out.
At the abandoned warehouse, Henry reports virtual Eureka is back on-line and this time they won't get out. "When we get the rest of them, I think I'm going to like it out here," Evil Carter says.
Ally and Fargo check the DNA profiles printed onto the bodies, including Jo and Henry and a dozen others. Zane finds them. Carter's DNA is among them.
Carter follows Dr. Yu and tells her he needs her expertise.
Fargo, Ally and Zane try to figure out who to call. Fargo decides to go talk to Shaw because they don't have his DNA so he couldn't be fake. But he dismisses Fargo and Jo tells him they have a lead on Grace.
Fargo tries to get away from Jo.
Zane tells Dr. Parrish (Wil Wheaton) his theory. They walk into Parrish's lab and come face to face with another Parrish.
The two Parrishes try to convince Zane which one is real and one finally tells Zane he trusts him. Zane shoots him, dematerializing him into goop. The real Parrish wouldn't trust him.
Parrish suggests developing something that just targets the Evil Clones, something like an EMP that fries their brain waves.
Fargo eyes everyone at GD suspiciously.
Holly jumps out and startles him, telling him she doesn't feel like herself any more. "They're making me do things," she says. She confesses to making bodies against her will, then suggests they go a quiet place to talk.
Ally goes home to get her kids to leave town, but Evil Carter is already there. Ally tries to convince him to leave the kids alone and explains to Kevin that he's not feeling well. Sarah the house runs a CT scan on Carter. Moments later, she zaps him. Her scan showed his cells were only one day old. Ally handcuffs him.
She calls Zane, who reports he has an EMP z bomb to test. Ally tells them to meet her at the cabin.
Holly leads Fargo out into the woods, feeling in his pocket. He pulls out the zapper, saying he wanted to trust her. He zaps her.
Ally drives Evil Carter to the cabin. He tells her Real Carter is napping. Evil Carter says when they're back inside the matrix they'll be able to work in safety without real world danger.
Parrish and Zane put the finishing touches on their machine. They're getting ready to leave when there's an announcement that GD is under lockdown.
Ally reaches a road block including Jo and Andy. She speeds up, crashing into the parked cars. The cruiser flips over, but she gets out unharmed. She runs off in the woods.
At GD, Parrish suggests that the NPC think he's Evil Parrish, so he can walk Zane out as his prisoner, just like Han did with Chewie in "Star Wars." Cut to Zane and Parrish under the control of the Clones. It didn't work.
Meanwhile, out in the woods, Carter, Jo and Andy stalk Ally. Carter sneaks up on Ally and she picks up a tree branch and whacks him. She heads to the road and flags down a car -- it's Fargo.
They speed off. Fargo has Holly unconscious in the backseat.
At Cafe Diem, people are getting antsy about people disappearing. Vincent hides people in his freezer, but then immediately tells Andy and Jo where they are.
At the cabin, Ally and Fargo try to figure out what to do without Zane's Z-bomb. They decide that it's possible Zane still has it and where ever he's being held they're using the control panel. So they just have to hook the bomb into the control panel -- as soon as they find out where everyone is being held.
They release Holly back into the wild and follow her and Carter to the warehouse.
Once they get there, Ally goes to find Zane's Z-bomb while Fargo syncs his PDA into the control unit to amplify the pulse.
Ally sneaks around the sleepy bodies and hides from Henry. She's completely freaked out when she sees they have dozens and dozens of people knocked out on stretchers. She finds Jack and unhooks him from whatever is sedating him, but he doesn't wake up.
Fargo syncs his PDA but it starts beeping and they chase him.
Fargo runs outside, drawing all the guards away. He runs into Evil Everyone. "You know what they say, 'Resistance is futile,'" Holly tells him.
The sync with the control panel finishes and Fargo uses it to turn the smart dust to night time. Flipping on the night vision on his glasses, he slips away.
Inside, Ally finds Zane and the Z-bomb. She's about to turn it on when a young girl finds her and starts calling her Mommy. It's an older Jenna.
She reminds herself Jenna's not real. While Ally's distracted, Carter sneaks up on Ally and grabs her.
Out in the woods at fake night time, Fargo runs into Andy. They switch the smart dust back to day time.
In the warehouse, Evil Carter hooks Ally up to the bed to knock her out. Real Jack finds them and rescues her, knocking out Evil Carter.
Ally and Carter run and she picks up the Z-bomb where it fell. They escape the warehouse.
Without the control panel they need another way to amplify the signal, Ally suggests the satellite dish at the cabin. They run as Evil Carter and the NPCs follow them.
At the cabin, Real Carter tries to barricade Evil Carter out, but he breaks through the ceiling. He drops down and pulls a gun.
Ally creeps around behind him and bashes him on the head. She climbs up to the dish on the roof as Carter fends off himself.
A horde of NPC evil clones races toward the cabin. Ally works to wire the Z bomb into the satellite. As the Evil Clones break through the cabin windows, Evil Carter gets Real Carter in a choke hold.
Ally finishes wiring the Z bomb and activates it. All the Evil Clones drop.
Back at GD, they put the NPC clones in deep freeze. There are ethical considerations to how they deal with them.
Holly is still comatose after two weeks. They get a 911 text about her. She wakes up.
She doesn't recognize Fargo or any of them. It's like a computer crashing and her hard drive is wiped.
At Cafe Diem, Carter and Ally try to figure out where they might move to. "At a certain point we have to ask ourselves if the universe is trying to tell us something," Carter says.
Shaw comes looking for Fargo. "Is there a problem?" Jo asks. "Isn't there always?" says Shaw.
He has news from the DOD. The department appreciates the work that's been done, but given the security breaches, they're terminating funding of Global Dynamics. "We're shutting Eureka down," he says.
More military trucks roll in to town.
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